Brother, the conspiracy theories , it true, still should not be part of an islamic website where you have beautifully shown and collated the Quranic miracles and had inter-faith dialogues.
I have no opinion on who did 9/11 or the Boston Bombings, but brother, why not make a sister website? A lot of people are turned off by these conspiracy theories, and will think Islam too is a conspiracy theory(true or false, the perception of 9/11 and zionism being talked about sparks of a sense of discontent).
Allah swt never remotely mentions 9/11 or these other things. Surely we should keep this website for what Allah swt does say, and produce a sister website (with the other material?)
It's easy for me to sit here and give this talk when it is you who do all this work, and i mean nothing negative in this. I say it because i care enough to.
Wasallam brother:)